The Library of Integrated Network-Based Cellular Signatures (LINCS) Program aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents. The LINCS Data and Signature Generation Centers produce a variety of data for the library. For such data to be standardized...


TCGA datasets are mRNA-seq data generated by The Cancer Genome Atlas project. The following cancers have been selected for study by TCGA because of their relatively poor prognosis and overall public health impact, as well as the availability of tumor and matched normal tissues that meet TCGA standards for patient consent, quality and quantity.


Gene Expression Omnibus Datasets (GDS) is a public functional genomics data repository supporting MIAME-compliant data submissions. Array- and sequence-based data are accepted. Tools are provided to help users query and download experiments and curated gene expression profiles. The GEO DataSets database stores original submitter-supplied records (Series, Samples and Platforms) as well as curated...